The statistics generated by trimhap require haplotype data from multiplex pedigrees.
trimhap-1.2.tar.gz: gzipped UNIX tar file (1.4Mb)
trimhap-1.2.tar: UNIX tar file (4.8Mb)
For faster download, use ftp. The address is
trimhap-1.1.tar.gz: gzipped UNIX tar file (1.2Mb)
trimhap-1.1.tar: gzipped UNIX tar file (5.4Mb)
To extract the contents of the tar file trimhap-1.2.tar, do
tar xvf trimhap-1.2.tar
which will create a subdirectory trimhap/ containing the following files and directories:
README - general instructions concerning trimhap
Copyright - copyright notice
INSTALL - installation instructions
/bin - pre-compiled executables for trimhap for DEC Alpha workstation and Sun Sparc-station
/code - Fortran source code for trimhap
/example - example problems
/docs - the trimhap user manual in PDF, PostScript, Wordperfect and MS Word format
!!! NOTE !!! : to compile source code, you need NAG library (libnag.a) installed on your system for linkage.
so check with your system administrator to see if you have it.
If you have questions or comments, please contact the author by email:
Charles J. Maclean
Any questions regarding software downloading and installation, email to:
RB Martin, CJ MacLean, PC Sham, RE Straub, and KS Kendler (1999).
Tests for linkage disequilibrium: haplotypes, multiplex pedigrees, and complex traits,
(Submitted for publication).
PostScript version of manuscript (0.5Mb)
CJ MacLean and RB Martin (1999).
TRIMHAP: Software for the trimmed-haplotype test of linkage disequilibrium
(User Manual, part of the TRIMHAP package)
Research Report, Virginia Institute for Psychiatric and Behavioral Genetics, Virginia Commonwealth University
PostScript version of trimhap manual
PDF version of trimhap manual
uuencoded WordPerfect 8.0**
uuencoded MS Word for windows**
**to open the uuencoded file in PC, right click the mouse on link, select "save l ink as" to save the file to your local pc and use winzip to unzip it into origin al format.
Charles J. MacLean