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Mx class in Quantitative Genetics

Topics for Fall 2004 (Fridays from 9am to 12pm in the VIPBG Conference Room (Biotech I), except for the first session which will be on Tuesday October 19 from 2pm to 5pm in the same location.
Text: Methodology for Genetic Studies of Twins and Families by Neale & Cardon
Manual: Mx: Statistical Modeling by Neale, Boker, Xie & Maes, PDF of Mx manual

DateLecture TopicLecturer
10/19 Causes of variation/ Biometrical Genetics
Path analysis/ Matrix algebra
Neale
Maes
10/22 Introduction to Mx (Graphical Interface)
Fitting saturated models
Maes
10/29 Maximum likelihood / Goodness-of-fit Statistics
Fitting univariate models
Neale
Maes
11/5 Multifactorial threshold model / Ascertainment
Fitting models to categorical data
Neale
Maes
11/12 Gene x age/sex/environment interaction
Testing for heterogeneity across sex/age
Maes
11/19 Genetic models for correlated data
Phenotypic factor analysis / Fitting bivariate models
Maes
12/3 Independent and common pathway models
Fitting multivariate models
Maes
12/10 Developmental continuity and change OR Extended Pedigrees
Fitting models to longitudinal data or extended pedigrees
Maes
12/17 Issues in study design & power
Power Calculations & Simulation
Neale
1/9 Methods for identifying QTL's
QTL analysis
Neale
1/16 Linkage and Association
Models for linkage and assocation
Neale

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Date last modified: August 31, 2005